Msp_g09884 (SSL3)


Aliases : SSL3

Description : EC_4.3 carbon-nitrogen lyase & original description: none


Gene families : OG0000347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g09884

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene11208.t1 SSL3, Aspi01Gene11208 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63166.t1 Aspi01Gene63166 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Cre12.g549050 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os07g35970.1 LOC_Os07g35970 Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os07g36060.1 LOC_Os07g36060 Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g16702 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g00549 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47278 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15679 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20593 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013995_P001 Zm00001e013995 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e033989_P001 Zm00001e033989 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016844 strictosidine synthase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 191 278
No external refs found!