Msp_g09564 (NDH48, NDF1)


Aliases : NDH48, NDF1

Description : component *(PnsB1/NDF1) of NDH subcomplex B & original description: none


Gene families : OG0008894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008894_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g09564
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00210500 NDH48, NDF1,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.07 OrthoFinder output from all 47 species
AT1G15980 NDH48, NDF1 NDH-dependent cyclic electron flow 1 0.11 OrthoFinder output from all 47 species
Aev_g12496 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Ala_g03899 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.12 OrthoFinder output from all 47 species
Als_g02461 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
Aop_g10352 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.14 OrthoFinder output from all 47 species
Aspi01Gene25365.t1 NDH48, NDF1,... component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0007.g011018 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.08 OrthoFinder output from all 47 species
Ceric.33G018200.1 NDH48, NDF1,... component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
Dac_g09317 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.11 OrthoFinder output from all 47 species
Dcu_g02770 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.1 OrthoFinder output from all 47 species
Dde_g25386 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.03 OrthoFinder output from all 47 species
Ehy_g20514 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01015957001 NDH48, NDF1 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.09 OrthoFinder output from all 47 species
LOC_Os08g17390.1 NDH48, NDF1,... component PnsB1/NDF1 of NDH subcomplex B 0.04 OrthoFinder output from all 47 species
Len_g38572 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.08 OrthoFinder output from all 47 species
Lfl_g14548 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
Mp4g06360.1 NDH48, NDF1 component PnsB1/NDF1 of NDH subcomplex B 0.04 OrthoFinder output from all 47 species
Nbi_g13870 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.15 OrthoFinder output from all 47 species
Ore_g37695 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.03 OrthoFinder output from all 47 species
Pir_g04871 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.09 OrthoFinder output from all 47 species
Pnu_g20798 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Ppi_g11927 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.1 OrthoFinder output from all 47 species
Sam_g27449 No alias component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Solyc03g116870.3.1 NDH48, NDF1,... component PnsB1/NDF1 of NDH subcomplex B 0.08 OrthoFinder output from all 47 species
Spa_g09259 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
Tin_g12524 NDH48, NDF1 component *(PnsB1/NDF1) of NDH subcomplex B & original... 0.12 OrthoFinder output from all 47 species
Zm00001e022142_P001 NDH48, NDF1,... component PnsB1/NDF1 of NDH subcomplex B 0.03 OrthoFinder output from all 47 species
Zm00001e039879_P005 NDH48, NDF1,... component PnsB1/NDF1 of NDH subcomplex B 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!