Msp_g09265

Description : component *(bL19c) of large plastid ribosomal-subunit proteome & original description: none

Gene families : OG0002345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002345_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g09265
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00210720	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.06	OrthoFinder output from all 47 species
AT4G17560	No alias	Ribosomal protein L19 family protein	0.04	OrthoFinder output from all 47 species
Adi_g008057	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g45795	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aop_g12532	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.09	OrthoFinder output from all 47 species
Ceric.24G049700.1	Ceric.24G049700	component *(bL19c) of large plastid ribosomal-subunit...	0.1	OrthoFinder output from all 47 species
Cre07.g322500	No alias	No description available	0.02	OrthoFinder output from all 47 species
Cre17.g734450	No alias	50S ribosomal protein L19, chloroplastic OS=Mesostigma viride	0.08	OrthoFinder output from all 47 species
Dac_g03571	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Dcu_g09086	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Dde_g00499	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Ehy_g05444	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g06479	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g13874	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01002112001	No alias	Protein biosynthesis.organelle translation...	0.06	OrthoFinder output from all 47 species
Gb_05695	No alias	component psRPL19 of large ribosomal subunit proteome	0.07	OrthoFinder output from all 47 species
LOC_Os02g43600.1	LOC_Os02g43600	component psRPL19 of large ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
Len_g08100	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Lfl_g33279	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
MA_947876g0010	No alias	50S ribosomal protein L19-1, chloroplastic...	0.04	OrthoFinder output from all 47 species
Mp3g02740.1	No alias	component mtRPL19 of large ribosomal subunit proteome....	0.06	OrthoFinder output from all 47 species
Nbi_g00593	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Pir_g02445	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Pnu_g16695	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Ppi_g01722	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012817	No alias	not classified & original description: CDS=1-963	0.04	OrthoFinder output from all 47 species
Sam_g17563	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Solyc08g078010.3.1	Solyc08g078010	component psRPL19 of large ribosomal subunit proteome	0.05	OrthoFinder output from all 47 species
Spa_g04552	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Tin_g01651	No alias	component *(bL19c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Zm00001e015296_P001	Zm00001e015296	component psRPL19 of large ribosomal subunit proteome	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006729	tetrahydrobiopterin biosynthetic process	IEP	HCCA
BP	GO:0006817	phosphate ion transport	IEP	HCCA
MF	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
CC	GO:0009538	photosystem I reaction center	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0034311	diol metabolic process	IEP	HCCA
BP	GO:0034312	diol biosynthetic process	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0046146	tetrahydrobiopterin metabolic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0046173	polyol biosynthetic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001857	Ribosomal_L19	116	214

External Links

No external refs found!

Msp_g09265

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation