Msp_g08413


Description : not classified & original description: none


Gene families : OG0001974 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001974_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08413

Target Alias Description ECC score Gene Family Method Actions
Adi_g015155 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g15834 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cre01.g056331 No alias Protein DJ-1 homolog C OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g23618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10382688g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_379058g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_5645362g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g04208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002818 DJ-1/PfpI 266 427
IPR002818 DJ-1/PfpI 60 224
No external refs found!