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  5. Msp_g08228

Msp_g08228


Description : component *(TRS23) of TRAPP-I/II/III complex-shared components & original description: none


Gene families : OG0005756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08228

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0027.g023540 No alias component *(TRS23) of TRAPP-I/II/III complex-shared... 0.04 OrthoFinder output from all 47 species
LOC_Os07g27150.1 LOC_Os07g27150 component TRS23 of TRAPP-I/II/III complex-shared components 0.04 OrthoFinder output from all 47 species
MA_10433849g0020 No alias component TRS23 of TRAPP-I/II/III complex-shared components 0.02 OrthoFinder output from all 47 species
Mp2g02240.1 No alias component TRS23 of TRAPP-I/II/III complex-shared components 0.04 OrthoFinder output from all 47 species
Solyc01g100840.3.1 Solyc01g100840 component TRS23 of TRAPP-I/II/III complex-shared components 0.02 OrthoFinder output from all 47 species
Tin_g29907 No alias component *(TRS23) of TRAPP-I/II/III complex-shared... 0.03 OrthoFinder output from all 47 species
Zm00001e036493_P001 Zm00001e036493 component TRS23 of TRAPP-I/II/III complex-shared components 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030008 TRAPP complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007233 TRAPPC 5 134
No external refs found!