1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g08012

Msp_g08012


Description : accessory protein *(PlCALM3) & original description: none


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08012

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00058730 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Aev_g34088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02194 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029866 No alias not classified & original description: CDS=1-1461 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046406 No alias not classified & original description: CDS=416-2011 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.123 No alias Putative clathrin assembly protein At4g25940... 0.02 OrthoFinder output from all 47 species
Cre09.g393136 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Mp3g16270.1 No alias Putative clathrin assembly protein At2g25430... 0.02 OrthoFinder output from all 47 species
Ore_g09579 No alias accessory protein *(PlCALM3) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11731 No alias accessory protein *(PlCALM3) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g007820.3.1 Solyc07g007820 Putative clathrin assembly protein At5g35200... 0.04 OrthoFinder output from all 47 species
Solyc07g008060.1.1 Solyc07g008060 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
Tin_g04681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027027_P002 Zm00001e027027 ECA1/2 clathrin coated vesicle adaptor protein 0.04 OrthoFinder output from all 47 species
Zm00001e038481_P001 Zm00001e038481 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 34 302
No external refs found!