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  5. Msp_g07797

Msp_g07797


Description : not classified & original description: none


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07797
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00182670 evm_27.TU.AmTr_v1... F-box protein At1g67340 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ala_g25416 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021897 No alias not classified & original description: CDS=923-2077 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 330 370
No external refs found!