1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g07178

Msp_g07178


Description : component *(LHCq) of LHC-II complex & original description: none


Gene families : OG0006405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006405_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07178
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g12540.1 LOC_Os09g12540 component LHCq of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp8g12010.1 No alias component LHCq of LHC-II complex 0.02 OrthoFinder output from all 47 species
Sam_g11969 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g20615 No alias component *(LHCq) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 115 290
No external refs found!