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  5. Msp_g07159

Msp_g07159


Description : substrate adaptor *(FBS) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0001990 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001990_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07159
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Ala_g28361 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.16 OrthoFinder output from all 47 species
Als_g08740 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.19 OrthoFinder output from all 47 species
Als_g13408 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.16 OrthoFinder output from all 47 species
Aop_g05457 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.08 OrthoFinder output from all 47 species
Aop_g11326 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.16 OrthoFinder output from all 47 species
Aspi01Gene38775.t1 Aspi01Gene38775 substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Azfi_s0104.g044708 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ceric.01G076500.1 Ceric.01G076500 substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.1 OrthoFinder output from all 47 species
Ceric.05G056900.1 Ceric.05G056900 substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.08 OrthoFinder output from all 47 species
Ceric.12G033400.1 Ceric.12G033400 substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.11 OrthoFinder output from all 47 species
Dac_g02785 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dcu_g09074 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Dcu_g09432 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.1 OrthoFinder output from all 47 species
GSVIVT01006513001 No alias F-box protein At4g35930 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_30100 No alias F-box protein At4g35930 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
LOC_Os10g30280.1 LOC_Os10g30280 F-box protein At4g35930 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g14639 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.1 OrthoFinder output from all 47 species
Lfl_g20012 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
MA_19354g0010 No alias F-box protein At4g35930 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g13798 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g14675 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ppi_g62452 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015035 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Sam_g24407 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.14 OrthoFinder output from all 47 species
Solyc03g033390.3.1 Solyc03g033390 F-box protein At4g35930 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Spa_g06134 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Spa_g52237 No alias substrate adaptor *(FBS) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Tin_g08863 No alias substrate adaptor *(FBS) of SCF E3 ubiquiTin ligase... 0.2 OrthoFinder output from all 47 species
Tin_g12923 No alias substrate adaptor *(FBS) of SCF E3 ubiquiTin ligase... 0.1 OrthoFinder output from all 47 species
Zm00001e010551_P001 Zm00001e010551 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!