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  5. Msp_g06627

Msp_g06627


Description : not classified & original description: none


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g06627
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00209400 evm_27.TU.AmTr_v1... CASP-like protein 2C1 OS=Sorghum bicolor 0.03 OrthoFinder output from all 47 species
AMTR_s00131p00032340 evm_27.TU.AmTr_v1... CASP-like protein 2A1 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT3G14380 No alias Uncharacterised protein family (UPF0497) 0.02 OrthoFinder output from all 47 species
Aop_g06538 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0381.g067386 No alias not classified & original description: CDS=336-929 0.04 OrthoFinder output from all 47 species
Ceric.02G018700.1 Ceric.02G018700 not classified & original description: pacid=50584078... 0.03 OrthoFinder output from all 47 species
Dac_g09088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp5g15430.1 No alias CASP-like protein 2U1 OS=Marchantia polymorpha... 0.03 OrthoFinder output from all 47 species
Ore_g04612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41718 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g054190.4.1 Solyc05g054190 CASP-like protein 2B1 OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Solyc07g006855.2.1 Solyc07g006855 CASP-like protein 2C1 OS=Populus trichocarpa... 0.04 OrthoFinder output from all 47 species
Spa_g16154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 14 169
No external refs found!