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  5. Msp_g06204

Msp_g06204


Description : ubiquitin adaptor protein *(TOL) & original description: none


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g06204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00234160 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00109p00078110 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
AT1G21380 No alias Target of Myb protein 1 0.03 OrthoFinder output from all 47 species
AT4G32760 No alias ENTH/VHS/GAT family protein 0.02 OrthoFinder output from all 47 species
AT5G16880 No alias Target of Myb protein 1 0.03 OrthoFinder output from all 47 species
Adi_g022789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g03896 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03493 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15302.t1 Aspi01Gene15302 ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z062500.1 Ceric.1Z062500 ubiquitin adaptor protein *(TOL) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.26G053600.1 Ceric.26G053600 ubiquitin adaptor protein *(TOL) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G060000.1 Ceric.35G060000 ubiquitin adaptor protein *(TOL) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g05692 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g39760.1 LOC_Os05g39760 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
LOC_Os10g42724.1 LOC_Os10g42724 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Len_g05274 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433759g0010 No alias TOM1-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g05840.1 No alias TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Ore_g15383 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12466 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000824 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g15243 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g097070.3.1 Solyc03g097070 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Solyc04g063280.3.1 Solyc04g063280 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Solyc09g014790.4.1 Solyc09g014790 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Spa_g05647 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16950 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28672 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g11081 No alias ubiquiTin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25340 No alias ubiquiTin adaptor protein *(TOL) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e011075_P001 Zm00001e011075 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
MF GO:0043130 ubiquitin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002014 VHS_dom 6 121
IPR004152 GAT_dom 205 277
No external refs found!