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  5. Msp_g05613

Msp_g05613


Description : not classified & original description: none


Gene families : OG0012787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012787_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g05613

Target Alias Description ECC score Gene Family Method Actions
Als_g07329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010880 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2943 0.04 OrthoFinder output from all 47 species
Ceric.32G033000.1 Ceric.32G033000 not classified & original description: pacid=50597405... 0.03 OrthoFinder output from all 47 species
Dde_g31659 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g19366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 599 625
IPR002885 Pentatricopeptide_repeat 538 562
IPR002885 Pentatricopeptide_repeat 566 589
IPR002885 Pentatricopeptide_repeat 637 660
IPR002885 Pentatricopeptide_repeat 400 423
IPR002885 Pentatricopeptide_repeat 425 463
IPR002885 Pentatricopeptide_repeat 226 270
IPR002885 Pentatricopeptide_repeat 122 168
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 325 371
No external refs found!