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  5. Msp_g05372

Msp_g05372 (SIP1)


Aliases : SIP1

Description : not classified & original description: none


Gene families : OG0000999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g05372

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00092110 AtSTS, STS,... Carbohydrate metabolism.raffinose family oligosaccharide... 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00147100 SIP1,... Galactinol--sucrose galactosyltransferase OS=Oryza... 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00147600 SIP1,... Carbohydrate metabolism.raffinose family oligosaccharide... 0.02 OrthoFinder output from all 47 species
Aev_g19198 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32731 SIP2, AtSIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0029.g024127 SIP1 not classified & original description: CDS=1-2895 0.03 OrthoFinder output from all 47 species
Dcu_g42441 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_25111 DIN10 galactinol-sucrose galactosyltransferase 0.02 OrthoFinder output from all 47 species
LOC_Os03g59430.2 SIP2, AtSIP2,... raffinose alpha-galactosidase 0.02 OrthoFinder output from all 47 species
MA_932560g0010 DIN10 Probable galactinol--sucrose galactosyltransferase 6... 0.03 OrthoFinder output from all 47 species
Msp_g16033 SIP2, AtSIP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08515 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33650 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023485 SIP2, AtSIP2 not classified & original description: CDS=1-2646 0.04 OrthoFinder output from all 47 species
Zm00001e031054_P001 DIN10, Zm00001e031054 galactinol-sucrose galactosyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 30 812
No external refs found!