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  5. Msp_g05135

Msp_g05135 (PRA1.B5)


Aliases : PRA1.B5

Description : B-G-class Rab-GDF protein & original description: none


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g05135
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Als_g42889 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11341.t1 PRA1.B5, Aspi01Gene11341 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G080600.1 PRA1.B5, Ceric.29G080600 B-G-class Rab-GDF protein & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os01g10010.2 PRA1.F3, PRA8,... B-G-class Rab-GDF protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g53070.1 PRA1.E, LOC_Os03g53070 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g58410.1 PRA1.E, LOC_Os03g58410 B-G-class Rab-GDF protein 0.04 OrthoFinder output from all 47 species
Zm00001e012065_P001 PRA1.E, Zm00001e012065 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Zm00001e023951_P001 PRA1.B2, Zm00001e023951 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Zm00001e031897_P001 PRA1.B2, Zm00001e031897 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 48 186
No external refs found!