1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g04774

Msp_g04774 (ATPDX1.3, RSR4,...)


Aliases : ATPDX1.3, RSR4, ATPDX1, PDX1.3, PDX1

Description : synthase component of pyridoxal 5-phosphate synthase complex & original description: none


Gene families : OG0001625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001625_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04774
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Aev_g24421 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.06 OrthoFinder output from all 47 species
Ala_g13022 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species
Als_g04767 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009574 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.04 OrthoFinder output from all 47 species
Azfi_s1817.g107163 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.02 OrthoFinder output from all 47 species
Cba_g66610 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.04 OrthoFinder output from all 47 species
Dac_g09304 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.04 OrthoFinder output from all 47 species
Pir_g12484 ATPDX1.3, RSR4,... synthase component of pyridoxal 5-phosphate synthase... 0.04 OrthoFinder output from all 47 species
Sam_g28771 No alias synthase component of pyridoxal 5-phosphate synthase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR033755 PdxS/SNZ_N 24 228
No external refs found!