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  5. Msp_g03954

Msp_g03954


Description : RlmN-type rRNA methyltransferase & original description: none


Gene families : OG0001131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g03954

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00171240 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g114284 No alias RlmN-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01756 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0665.g081748 No alias RlmN-type rRNA methyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01037840001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g45370.1 LOC_Os01g45370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g74190.1 LOC_Os01g74190 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g08220 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g12660.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g10707 No alias RlmN-type rRNA methyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g46988 No alias RlmN-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Smo122498 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g52977 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007197 rSAM 155 319
No external refs found!