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Aliases : OTP84
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00268120 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g29760,... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G03380 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G14850 | LOI1, MEF11 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G18840 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G09950 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004372 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012988 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g024957 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g034179 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g035608 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036754 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g051582 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g069066 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g095424 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g21644 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12481 | OTP82 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g04930 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g06831 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07446 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g47255 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g60846 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g23363 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g28195 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g39832 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03230 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03233 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03830 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g09162 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11871 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16342 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g17441 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g23572 | CRR2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g23985 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g26873 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g33115 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g61630 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g67894 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000396 | No alias | not classified & original description: CDS=1-2745 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024956 | No alias | not classified & original description: CDS=109-3012 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033749 | No alias | not classified & original description: CDS=1-3141 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07323 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12399 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g25200 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g44516 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G059000.1 | Ceric.04G059000 | not classified & original description: pacid=50632212... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.17G054900.1 | DOT4, Ceric.17G054900 | not classified & original description: pacid=50617812... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G048700.1 | CRR22, Ceric.20G048700 | not classified & original description: pacid=50567179... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G079900.1 | VAC1, ECB2,... | not classified & original description: pacid=50614302... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g27114 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05681 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g16466 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22180 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12128 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13146 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g24510 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01036975001 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_27891 | OTP86 | RNA editing factor (OTP86) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_33726 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g08680.1 | LOC_Os03g08680 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g24640.1 | REME1, LOC_Os09g24640 | Pentatricopeptide repeat-containing protein At2g36730... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g02415 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g17579 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05723 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g05740 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06745 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07396 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07683 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07847 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g11837 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g13946 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g24046 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g29257 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g33055 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_8893194g0010 | MEF1 | RNA editing factor (MEF1) | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g14854 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g13680 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g15421 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g20192 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g27954 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g29103 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g32187 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g01500 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g20007 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g34957 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0264.g026932 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2163 | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g096610.2.1 | Solyc03g096610 | Pentatricopeptide repeat-containing protein At1g33350... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08436 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g09360 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g15227 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g16563 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g21106 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g24508 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g28935 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g30407 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g47167 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50396 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50449 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g06127 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06583 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e005246_P001 | Zm00001e005246 | Pentatricopeptide repeat-containing protein At2g41080... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029819_P003 | CRR22, Zm00001e029819 | RNA editing factor (CRR22) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039026_P001 | OTP82, Zm00001e039026 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 506 | 528 |
| IPR002885 | Pentatricopeptide_repeat | 299 | 324 |
| IPR002885 | Pentatricopeptide_repeat | 402 | 425 |
| IPR002885 | Pentatricopeptide_repeat | 328 | 374 |
| IPR002885 | Pentatricopeptide_repeat | 531 | 579 |
| IPR002885 | Pentatricopeptide_repeat | 21 | 68 |
| IPR002885 | Pentatricopeptide_repeat | 225 | 272 |
| IPR002885 | Pentatricopeptide_repeat | 123 | 171 |
| IPR002885 | Pentatricopeptide_repeat | 429 | 476 |
| No external refs found! |