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  5. Msp_g02739

Msp_g02739


Description : not classified & original description: none


Gene families : OG0001666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g02739

Target Alias Description ECC score Gene Family Method Actions
AT1G44770 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
Aop_g00324 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009113 No alias not classified & original description: CDS=292-1281 0.03 OrthoFinder output from all 47 species
Dac_g08596 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g00453 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_00979 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g00700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g076110.4.1 Solyc04g076110 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g030390.2.1 Solyc11g030390 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g10172 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016055_P002 Zm00001e016055 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!