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  5. Msp_g01882

Msp_g01882 (RABA4D, ATRABA4D)


Aliases : RABA4D, ATRABA4D

Description : A-class RAB GTPase & original description: none


Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g01882

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g23100.1 AtRABA4a,... A-class RAB GTPase 0.05 OrthoFinder output from all 47 species
MA_10428137g0010 AtRABA4a, RABA4a A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Mp3g12050.1 ATRABA4C, RABA4C, SMG1 A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Sam_g08197 No alias A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g010100.2.1 AtRABA4a,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Spa_g47852 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000673_P001 AtRABA4a,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e038828_P001 AtRABA4a,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 13 173
No external refs found!