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  5. Msp_g01454

Msp_g01454


Description : PLATZ-type transcription factor & original description: none


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g01454
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00208550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00039680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
AT1G32700 No alias PLATZ transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT1G43000 No alias PLATZ transcription factor family protein 0.04 OrthoFinder output from all 47 species
AT3G60670 No alias PLATZ transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT4G17900 No alias PLATZ transcription factor family protein 0.02 OrthoFinder output from all 47 species
Adi_g059752 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01678 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23038 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030564 No alias PLATZ-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g19260 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G009800.1 Ceric.01G009800 PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.02G063700.1 Ceric.02G063700 PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G045400.1 Ceric.20G045400 PLATZ-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.34G037900.1 Ceric.34G037900 PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g05011 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02566 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g29417 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00770 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001279001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
GSVIVT01031446001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
LOC_Os02g46610.1 LOC_Os02g46610 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os04g50120.1 LOC_Os04g50120 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os06g41930.2 LOC_Os06g41930 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os10g42410.3 LOC_Os10g42410 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Len_g20027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11641 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37520 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_9760264g0010 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Pnu_g07254 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020601 No alias PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Solyc06g061240.4.1 Solyc06g061240 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Solyc08g005100.3.1 Solyc08g005100 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Tin_g09888 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023175_P001 Zm00001e023175 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 76 147
No external refs found!