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Description : associated component *(AFR) of histone deacetylase machineries & original description: none
Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g046047 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g21449 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23594 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g50138 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G066600.1 | Ceric.07G066600 | associated component *(AFR) of histone deacetylase... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.18G085500.1 | Ceric.18G085500 | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06059 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08311 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019028001 | No alias | Chromatin organisation.histone modifications.histone... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g57740.1 | LOC_Os02g57740 | associated component SAP30 of histone deacetylase machineries | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g08450.3 | LOC_Os04g08450 | associated component SAP30 of histone deacetylase machineries | 0.03 | OrthoFinder output from all 47 species | |
| Len_g16678 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| MA_600107g0010 | No alias | associated component SAP30 of histone deacetylase machineries | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13794 | No alias | associated component *(AFR) of histone deacetylase... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g00912 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g20047 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03746 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10450 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12084 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025718 | SAP30_Sin3-bd | 167 | 220 |
| No external refs found! |