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  5. Msp_g01246

Msp_g01246


Description : component *(CAP-D2B) of condensin II complex & original description: none


Gene families : OG0008196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g01246

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00227490 No alias Cell cycle.mitosis and meiosis.chromatin... 0.09 OrthoFinder output from all 47 species
Als_g15728 No alias component *(CAP-D2B) of condensin II complex & original... 0.04 OrthoFinder output from all 47 species
Aop_g06266 No alias component *(CAP-D2B) of condensin II complex & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0136.g050948 No alias component *(CAP-D2B) of condensin II complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G026000.1 Ceric.01G026000 component *(CAP-D2B) of condensin II complex & original... 0.07 OrthoFinder output from all 47 species
Cre05.g241150 No alias Cell cycle.mitosis and meiosis.chromatin... 0.02 OrthoFinder output from all 47 species
Dcu_g14984 No alias component *(CAP-D2B) of condensin II complex & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01017722001 No alias Cell cycle.mitosis and meiosis.chromatin... 0.04 OrthoFinder output from all 47 species
Gb_33189 No alias component CAP-D2B of condensin II complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g36170.1 LOC_Os12g36170 component CAP-D2B of condensin II complex 0.03 OrthoFinder output from all 47 species
Len_g59607 No alias component *(CAP-D2B) of condensin II complex & original... 0.03 OrthoFinder output from all 47 species
MA_8028g0010 No alias component CAP-D2B of condensin II complex 0.06 OrthoFinder output from all 47 species
MA_92126g0010 No alias component CAP-D2B of condensin II complex 0.05 OrthoFinder output from all 47 species
Mp4g01570.1 No alias component CAP-D2B of condensin II complex 0.05 OrthoFinder output from all 47 species
Nbi_g09903 No alias component *(CAP-D2B) of condensin II complex & original... 0.04 OrthoFinder output from all 47 species
Ppi_g14228 No alias component *(CAP-D2B) of condensin II complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005664 No alias component *(CAP-D2B) of condensin II complex & original... 0.05 OrthoFinder output from all 47 species
Zm00001e039691_P001 Zm00001e039691 component CAP-D2B of condensin II complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032682 Cnd1_C 1126 1304
No external refs found!