Msp_g01038

Description : E3 ubiquitin ligase *(CHY) & original description: none

Gene families : OG0002193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g01038

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os03g22680.1	LOC_Os03g22680	E3 ubiquitin-protein ligase SRFP1 OS=Oryza sativa subsp....	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008913	Znf_CHY	48	128
IPR001841	Znf_RING	182	225
IPR039512	RCHY1_zinc-ribbon	230	288

External Links

No external refs found!