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  5. Msp_g00702

Msp_g00702


Description : nucleocytoplasmic transport karyopherin *(MOS14) & original description: none


Gene families : OG0004537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g00702
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AT5G62600 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g33942 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001027.19 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g43936 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01007840001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
LOC_Os10g33770.1 LOC_Os10g33770 TNPO3 nucleocytoplasmic transport karyopherin 0.02 OrthoFinder output from all 47 species
Lfl_g36168 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.03 OrthoFinder output from all 47 species
Mp8g15200.1 No alias TNPO3 nucleocytoplasmic transport karyopherin 0.02 OrthoFinder output from all 47 species
Smo100270 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Zm00001e004571_P001 Zm00001e004571 TNPO3 nucleocytoplasmic transport karyopherin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
MF GO:0031267 small GTPase binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 26 91
IPR013598 Exportin-1/Importin-b-like 99 243
No external refs found!