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  5. Msp_g00295

Msp_g00295


Description : not classified & original description: none


Gene families : OG0007246 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007246_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g00295
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Ala_g00689 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aob_g01060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01083 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0242.g059851 No alias not classified & original description: CDS=79-1149 0.03 OrthoFinder output from all 47 species
Cba_g08319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.38G025800.1 Ceric.38G025800 not classified & original description: pacid=50579324... 0.12 OrthoFinder output from all 47 species
Dac_g02073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01038586001 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.08 OrthoFinder output from all 47 species
Gb_09516 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os10g35810.1 LOC_Os10g35810 Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.07 OrthoFinder output from all 47 species
Len_g04136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429821g0010 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp1g10990.1 No alias Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.05 OrthoFinder output from all 47 species
Nbi_g12697 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g37297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37298 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g57312 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32727 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015268 No alias not classified & original description: CDS=42-668 0.03 OrthoFinder output from all 47 species
Sam_g08902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g082890.3.1 Solyc03g082890 Thylakoid lumenal 17.4 kDa protein, chloroplastic... 0.08 OrthoFinder output from all 47 species
Spa_g53789 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 170 209
IPR001646 5peptide_repeat 124 153
No external refs found!