Tin_g45458


Description : not classified & original description: none


Gene families : OG0002536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002536_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g45458

Target Alias Description ECC score Gene Family Method Actions
Adi_g079740 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g086305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04494 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G038500.1 Ceric.06G038500 not classified & original description: pacid=50619682... 0.03 OrthoFinder output from all 47 species
Ceric.1Z179300.1 Ceric.1Z179300 not classified & original description: pacid=50577067... 0.03 OrthoFinder output from all 47 species
Dac_g00993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02991 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g10552 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006457 protein folding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!