Tin_g44676 (RPP4)

Aliases : RPP4

Description : not classified & original description: none

Gene families : OG0009276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009276_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g44676

Target	Alias	Description	ECC score	Gene Family Method
Ala_g21143	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ala_g26287	SNC1, BAL	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g02594	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene27827.t1	Aspi01Gene27827	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g28720	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g40910	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g23888	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Len_g40249	cog1, RPP1	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Len_g48628	RPP13	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g31691	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g57161	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g33698	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	85	184

External Links

No external refs found!