Tin_g43976 (SGR4, ZIG1, VTI1A,...)

Aliases : SGR4, ZIG1, VTI1A, ATVTI11, VTI11, ZIG, ATVTI1A

Description : Qb-type VTI-group component of SNARE membrane fusion complex & original description: none

Gene families : OG0002267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002267_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g43976

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os01g37980.1	ATVTI13, VTI13,...	VTI group Qb-type SNARE protein	0.02	OrthoFinder output from all 47 species
LOC_Os01g51120.1	ATVTI13, VTI13,...	VTI group Qb-type SNARE protein	0.02	OrthoFinder output from all 47 species
Lfl_g21752	SGR4, ZIG1,...	Qb-type VTI-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Mp1g12970.1	SGR4, ZIG1,...	VTI group Qb-type SNARE protein	0.02	OrthoFinder output from all 47 species
Spa_g06947	SGR4, ZIG1,...	Qb-type VTI-group component of SNARE membrane fusion...	0.04	OrthoFinder output from all 47 species
Zm00001e020013_P001	ATVTI13, VTI13,...	VTI group Qb-type SNARE protein	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003839	gamma-glutamylcyclotransferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006749	glutathione metabolic process	IEP	HCCA
BP	GO:0006751	glutathione catabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016842	amidine-lyase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0043171	peptide catabolic process	IEP	HCCA
BP	GO:0044273	sulfur compound catabolic process	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007705	Vesicle_trsprt_v-SNARE_N	68	146

External Links

No external refs found!