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  5. Tin_g42084

Tin_g42084


Description : transcription factor *(YABBY) & original description: none


Gene families : OG0002690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002690_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g42084

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00054100 YAB5,... RNA biosynthesis.transcriptional activation.C2C2... 0.01 OrthoFinder output from all 47 species
Aob_g31417 No alias transcription factor *(YABBY) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g46364 INO transcription factor *(YABBY) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g54785 YAB5 transcription factor *(YABBY) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g63876 No alias transcription factor *(YABBY) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08800 No alias transcription factor *(YABBY) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g33089 No alias transcription factor *(YABBY) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0018580 nitronate monooxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR006780 YABBY 8 62
No external refs found!