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  5. Tin_g40983

Tin_g40983 (ATEP3, EP3, CHIV, ATCHITIV)


Aliases : ATEP3, EP3, CHIV, ATCHITIV

Description : not classified & original description: none


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g40983
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Aev_g38872 HCHIB, B-CHI,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32076.t1 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32079.t1 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000746 ATEP3, EP3,... not classified & original description: CDS=491-1327 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000750 ATEP3, EP3,... not classified & original description: CDS=1-942 0.02 OrthoFinder output from all 47 species
Ehy_g32022 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g33150.1 HCHIB, B-CHI,... Chitinase 7 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_295712g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 86 287
IPR001002 Chitin-bd_1 27 65
No external refs found!