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  5. Tin_g38988

Tin_g38988


Description : component *(Tic62) of inner envelope TIC translocation system & original description: none


Gene families : OG0001315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g38988

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00069090 evm_27.TU.AmTr_v1... Uncharacterized protein At2g34460, chloroplastic... 0.03 OrthoFinder output from all 47 species
AMTR_s00059p00166490 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.06 OrthoFinder output from all 47 species
AT2G34460 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G18890 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g056302 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g115349 TROL not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g13737 No alias component *(Tic62) of inner envelope TIC translocation... 0.07 OrthoFinder output from all 47 species
Aev_g44199 TROL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08850 No alias component *(Tic62) of inner envelope TIC translocation... 0.08 OrthoFinder output from all 47 species
Aop_g26310 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Azfi_s0506.g073968 No alias component *(Tic62) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Cba_g34938 No alias component *(Tic62) of inner envelope TIC translocation... 0.11 OrthoFinder output from all 47 species
Cba_g37473 No alias component *(Tic62) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Ceric.1Z144700.1 Ceric.1Z144700 component *(Tic62) of inner envelope TIC translocation... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021493.51 No alias Uncharacterized protein At2g34460, chloroplastic... 0.01 OrthoFinder output from all 47 species
Cre06.g269050 No alias Protein translocation.chloroplast.inner envelope TIC... 0.04 OrthoFinder output from all 47 species
Dac_g06215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g42405 No alias component *(Tic62) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Ehy_g16505 No alias component *(Tic62) of inner envelope TIC translocation... 0.07 OrthoFinder output from all 47 species
GSVIVT01031907001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.06 OrthoFinder output from all 47 species
LOC_Os10g01044.1 LOC_Os10g01044 TIC62 protein involved in ferredoxin-NADP oxidoreductase... 0.03 OrthoFinder output from all 47 species
Len_g21786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45580 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Len_g45581 No alias component *(Tic62) of inner envelope TIC translocation... 0.07 OrthoFinder output from all 47 species
Lfl_g10375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16601 No alias component *(Tic62) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
MA_10429419g0010 No alias Protein TIC 62, chloroplastic OS=Pisum sativum... 0.1 OrthoFinder output from all 47 species
MA_332596g0010 No alias Uncharacterized protein At2g34460, chloroplastic... 0.12 OrthoFinder output from all 47 species
Msp_g15467 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g19097 No alias component *(Tic62) of inner envelope TIC translocation... 0.07 OrthoFinder output from all 47 species
Ore_g13449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32758 No alias component *(Tic62) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Pnu_g12655 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g16820 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007763 No alias not classified & original description: CDS=26-871 0.03 OrthoFinder output from all 47 species
Sam_g22704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g35890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g051110.1.1 Solyc10g051110 TIC62 protein involved in ferredoxin-NADP oxidoreductase... 0.04 OrthoFinder output from all 47 species
Spa_g00929 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06152 No alias component *(Tic62) of inner envelope TIC translocation... 0.09 OrthoFinder output from all 47 species
Spa_g21915 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e011593_P001 Zm00001e011593 TIC62 protein involved in ferredoxin-NADP oxidoreductase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 186 343
No external refs found!