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  5. Tin_g38213

Tin_g38213


Description : GASA precursor polypeptide & original description: none


Gene families : OG0000541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g38213

Target Alias Description ECC score Gene Family Method Actions
AT2G39540 No alias Gibberellin-regulated family protein 0.04 OrthoFinder output from all 47 species
AT5G15230 GASA4 GAST1 protein homolog 4 0.04 OrthoFinder output from all 47 species
Aspi01Gene33463.t1 Aspi01Gene33463 GASA precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.07G011200.1 GASA3, Ceric.07G011200 GASA precursor polypeptide & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g14897 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27816 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28012 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01034476001 No alias Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
Gb_24074 No alias GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
LOC_Os03g55290.1 LOC_Os03g55290 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
LOC_Os05g31280.1 LOC_Os05g31280 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
LOC_Os06g15620.1 LOC_Os06g15620 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Len_g45849 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46952 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
MA_10086937g0010 No alias GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
MA_10142784g0010 No alias GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
MA_24001g0010 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_561105g0010 No alias GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
MA_717315g0010 GASA2 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_7575249g0010 No alias GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
MA_9084305g0010 GASA2 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Msp_g08513 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08529 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17862 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29707 No alias GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27903 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44109 GASA1 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56045 GASA3 GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14184 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g20309 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002523 GASA5 GASA precursor polypeptide & original description: CDS=1-306 0.03 OrthoFinder output from all 47 species
Solyc01g107370.3.1 Solyc01g107370 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Solyc02g083870.3.1 Solyc02g083870 GASA precursor polypeptide 0.06 OrthoFinder output from all 47 species
Solyc02g089350.3.1 Solyc02g089350 GASA precursor polypeptide 0.05 OrthoFinder output from all 47 species
Solyc03g116060.4.1 Solyc03g116060 GASA precursor polypeptide 0.05 OrthoFinder output from all 47 species
Solyc06g007910.4.1 GASA4, Solyc06g007910 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Solyc08g005620.3.1 Solyc08g005620 GASA precursor polypeptide 0.06 OrthoFinder output from all 47 species
Solyc12g042500.2.1 Solyc12g042500 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR003854 GASA 84 143
No external refs found!