Tin_g36312

Description : component *(eL21) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001239_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g36312
Cluster	HCCA: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00252940	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AMTR_s00024p00178920	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AT1G09590	No alias	Translation protein SH3-like family protein	0.03	OrthoFinder output from all 47 species
AT1G09690	No alias	Translation protein SH3-like family protein	0.03	OrthoFinder output from all 47 species
AT1G57660	No alias	Translation protein SH3-like family protein	0.05	OrthoFinder output from all 47 species
Adi_g043900	No alias	component *(eL21) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g09546	No alias	component *(eL21) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000640.5	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Cre06.g278135	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
Dac_g25425	No alias	component *(eL21) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
GSVIVT01033455001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Gb_09077	No alias	component RPL21 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os03g04750.1	LOC_Os03g04750	component RPL21 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Msp_g34423	No alias	component *(eL21) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pp3c12_9320V3.1	Pp3c12_9320	Translation protein SH3-like family protein	0.02	OrthoFinder output from all 47 species
Pp3c13_2360V3.1	Pp3c13_2360	Translation protein SH3-like family protein	0.04	OrthoFinder output from all 47 species
Pp3c3_5550V3.1	Pp3c3_5550	Translation protein SH3-like family protein	0.02	OrthoFinder output from all 47 species
Pp3c4_21520V3.1	Pp3c4_21520	Translation protein SH3-like family protein	0.03	OrthoFinder output from all 47 species
Ppi_g21572	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g38886	No alias	component *(eL21) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g52957	No alias	component *(eL21) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Solyc10g078960.2.1	Solyc10g078960	component RPL21 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Tin_g39769	No alias	component *(eL21) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Zm00001e012727_P001	Zm00001e012727	component RPL21 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Zm00001e038963_P001	Zm00001e038963	component RPL21 of LSU proteome component	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001147	Ribosomal_L21e	1	100

External Links

No external refs found!

Tin_g36312

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation