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  5. Tin_g32520

Tin_g32520 (RAP2.6)


Aliases : RAP2.6

Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g32520

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00039760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AT4G27950 CRF4 cytokinin response factor 4 0.03 OrthoFinder output from all 47 species
Adi_g053440 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g056328 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01005 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g04104 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g07170 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g10933 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g12762 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g25693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33703 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04135 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Als_g26687 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38628 No alias cutin and suberin biosynthesis transcription factor... 0.02 OrthoFinder output from all 47 species
Als_g39098 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g48568 ERF110 subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52359 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g19242 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33297 CRF3 subgroup ERF-VI transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38397 RAP2.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03223.t1 DEAR2, Aspi01Gene03223 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08500.t1 ATERF3, ERF3,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene24402.t1 DEAR2, Aspi01Gene24402 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27034.t1 TINY2, Aspi01Gene27034 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene34446.t1 Aspi01Gene34446 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35032.t1 Rap2.6L, Aspi01Gene35032 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43376.t1 DREB26, Aspi01Gene43376 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene43377.t1 DREB26, Aspi01Gene43377 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene47263.t1 tny, Aspi01Gene47263 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene47288.t1 Aspi01Gene47288 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53915.t1 Aspi01Gene53915 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene58616.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene61391.t1 DEAR3, Aspi01Gene61391 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g60426 tny subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.05G034500.1 DEAR2, Ceric.05G034500 not classified & original description: pacid=50578330... 0.03 OrthoFinder output from all 47 species
Ceric.10G058000.1 ORA47, Ceric.10G058000 not classified & original description: pacid=50613486... 0.04 OrthoFinder output from all 47 species
Ceric.13G021800.1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.20G089300.1 PUCHI, Ceric.20G089300 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.29G030300.1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.29G030400.1 AtERF48, DREB2C,... subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g21287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31512 DREB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33212 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Dac_g34743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40206 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16914 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dcu_g25683 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19945 No alias subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22214 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g23206 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Gb_11807 No alias transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Gb_41836 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Len_g08536 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g22270 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_83118g0010 No alias transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Msp_g21305 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g00480 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g00522 No alias subgroup ERF-III transcription factor & original... 0.08 OrthoFinder output from all 47 species
Nbi_g01764 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g04123 TINY2 subgroup ERF-III transcription factor & original... 0.07 OrthoFinder output from all 47 species
Nbi_g10464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12396 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g14223 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g53948 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c5_11150V3.1 Pp3c5_11150 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Ppi_g12543 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013375 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Solyc05g052410.3.1 DREB2A, DREB2,... transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Solyc08g066660.1.1 TINY2, Solyc08g066660 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Spa_g09063 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g12751 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15143 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g17336 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g08312 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 240 289
No external refs found!