1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g31414

Tin_g31414


Description : helicase UAP56 & original description: none


Gene families : OG0002123 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002123_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g31414

Target Alias Description ECC score Gene Family Method Actions
Aev_g13080 No alias helicase UAP56 & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32429 No alias helicase UAP56 & original description: none 0.07 OrthoFinder output from all 47 species
Als_g52184 No alias helicase UAP56 & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12468 No alias helicase UAP56 & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07010 No alias helicase UAP56 & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g38480 No alias helicase UAP56 & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g19847 No alias helicase UAP56 & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g36920.2 LOC_Os01g36920 RNA helicase (Sub2). helicase component UAP56 of... 0.02 OrthoFinder output from all 47 species
Lfl_g13215 No alias helicase UAP56 & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29266 No alias helicase UAP56 & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43528 No alias helicase UAP56 & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g07150 No alias helicase UAP56 & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47104 No alias helicase UAP56 & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027715_P001 Zm00001e027715 RNA helicase (Sub2). helicase component UAP56 of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 37 202
IPR001650 Helicase_C 242 349
No external refs found!