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  5. Tin_g30418

Tin_g30418 (XTR4, XTH30)


Aliases : XTR4, XTH30

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0000942 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000942_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g30418
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT2G01850 XTH27, ATXTH27, EXGT-A3 endoxyloglucan transferase A3 0.03 OrthoFinder output from all 47 species
Cba_g13321 XTR4, XTH30 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G005800.1 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g00711 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07196 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37413 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13412 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000070_P001 XTH32, Zm00001e000070 xyloglucan endotransglucosylase/hydrolase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR010713 XET_C 276 313
IPR000757 GH16 48 228
No external refs found!