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  5. Tin_g27845

Tin_g27845 (GL19, AGL19)


Aliases : GL19, AGL19

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g27845
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AT1G26310 AGL10, CAL1, CAL K-box region and MADS-box transcription factor family protein 0.04 OrthoFinder output from all 47 species
AT1G69120 AGL7, AP1 K-box region and MADS-box transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT1G77980 AGL66 AGAMOUS-like 66 0.02 OrthoFinder output from all 47 species
Aev_g09257 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27482 AGL104 MADS/AGL-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g07325 AGL8, FUL not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_6279308g0010 SOC1, AGL20, ATSOC1 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
MA_9544285g0010 AGL42 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g069430.3.1 AGL8, FUL, Solyc06g069430 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Spa_g53494 AGL16 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR002487 TF_Kbox 75 154
IPR002100 TF_MADSbox 10 57
No external refs found!