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  5. Tin_g27709

Tin_g27709 (FH6, ATFH6)


Aliases : FH6, ATFH6

Description : group-I formin acTin filament elongation factor & original description: none


Gene families : OG0001137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g27709
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT1G24150 FH4, ATFH4 formin homologue 4 0.03 OrthoFinder output from all 47 species
AT1G59910 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 OrthoFinder output from all 47 species
Ceric.22G057800.1 AHF1, FH1, AFH1,... group-I formin actin filament elongation factor &... 0.04 OrthoFinder output from all 47 species
Ehy_g01646 No alias group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01007836001 ATFH8, FH8 External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
LOC_Os02g50570.1 ATFH8, FH8,... group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g34180.1 AHF1, FH1, AFH1,... group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
Len_g59609 FH6, ATFH6 group-I formin actin filament elongation factor &... 0.04 OrthoFinder output from all 47 species
Msp_g41409 AHF1, FH1, AFH1, ATFH1 group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Pir_g45335 FH6, ATFH6 group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Solyc05g006430.3.1 ATFH8, FH8,... group-I formin actin filament elongation factor 0.05 OrthoFinder output from all 47 species
Zm00001e035421_P004 FH6, ATFH6,... group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
Zm00001e040521_P001 ATFH5, Fh5,... group-I formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004930 G protein-coupled receptor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR015425 FH2_Formin 806 1197
No external refs found!