Tin_g27104


Description : not classified & original description: none


Gene families : OG0004585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004585_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g27104

Target Alias Description ECC score Gene Family Method Actions
AT2G46375 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Aev_g17182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02261 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g36629 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11840 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.36G008200.1 Ceric.36G008200 not classified & original description: pacid=50568289... 0.06 OrthoFinder output from all 47 species
Dac_g13639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g24244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09602 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g11049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20408 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e033845_P001 Zm00001e033845 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e042467_P001 Zm00001e042467 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!