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  5. Tin_g26290

Tin_g26290


Description : not classified & original description: none


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26290
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT1G52320 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
LOC_Os09g36760.1 LOC_Os09g36760 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g10713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g42213 No alias signalling factor *(NRG2) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0218.g026102 No alias not classified & original description: CDS=1-2688 0.03 OrthoFinder output from all 47 species
Solyc09g007100.3.1 Solyc09g007100 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR006867 DUF632 236 532
IPR006868 DUF630 1 58
No external refs found!