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  5. Tin_g25963

Tin_g25963


Description : component *(eL31) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000630 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g25963
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00233860 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 OrthoFinder output from all 47 species
AT2G19740 No alias Ribosomal protein L31e family protein 0.02 OrthoFinder output from all 47 species
AT4G26230 No alias Ribosomal protein L31e family protein 0.02 OrthoFinder output from all 47 species
AT5G56710 No alias Ribosomal protein L31e family protein 0.07 OrthoFinder output from all 47 species
Adi_g022958 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Adi_g048332 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Adi_g113545 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Adi_g120495 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g00383 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g19969 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Als_g05320 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g11606 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Als_g24458 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Als_g58224 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07507 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Aob_g41513 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g29195 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g33204 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Aop_g50668 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g50669 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aspi01Gene45329.t1 Aspi01Gene45329 component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0108.g045264 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.13 OrthoFinder output from all 47 species
Cba_g08010 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g08011 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ceric.13G014100.1 Ceric.13G014100 component *(eL31) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Ceric.24G003800.1 Ceric.24G003800 component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020703.20 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.24 OrthoFinder output from all 47 species
Cre12.g489153 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 OrthoFinder output from all 47 species
Dac_g07183 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.15 OrthoFinder output from all 47 species
Dac_g26744 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Dac_g26920 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g11425 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g30287 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g38330 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Dcu_g45156 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dde_g37011 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01015251001 No alias 60S ribosomal protein L31 OS=Nicotiana glutinosa 0.16 OrthoFinder output from all 47 species
GSVIVT01032061001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
Gb_05851 No alias component RPL31 of LSU proteome component 0.09 OrthoFinder output from all 47 species
Gb_24728 No alias component RPL31 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os02g48660.1 LOC_Os02g48660 component RPL31 of LSU proteome component 0.14 OrthoFinder output from all 47 species
LOC_Os06g21480.1 LOC_Os06g21480 component RPL31 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os08g39500.1 LOC_Os08g39500 component RPL31 of LSU proteome component 0.01 OrthoFinder output from all 47 species
Len_g03010 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Len_g14130 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Lfl_g35134 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
MA_14317g0010 No alias component RPL31 of LSU proteome component 0.07 OrthoFinder output from all 47 species
MA_8286g0010 No alias component RPL31 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp7g18320.1 No alias component RPL31 of LSU proteome component 0.14 OrthoFinder output from all 47 species
Msp_g36534 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Msp_g39885 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ore_g40201 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g58237 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pir_g58363 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c10_8090V3.1 Pp3c10_8090 Ribosomal protein L31e family protein 0.07 OrthoFinder output from all 47 species
Pp3c14_7550V3.1 Pp3c14_7550 Ribosomal protein L31e family protein 0.09 OrthoFinder output from all 47 species
Pp3c1_34390V3.1 Pp3c1_34390 Ribosomal protein L31e family protein 0.07 OrthoFinder output from all 47 species
Pp3c25_8980V3.1 Pp3c25_8980 Ribosomal protein L31e family protein 0.03 OrthoFinder output from all 47 species
Pp3c2_16490V3.1 Pp3c2_16490 Ribosomal protein L31e family protein 0.09 OrthoFinder output from all 47 species
Ppi_g02505 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g16789 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g19345 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g22733 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ppi_g28593 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g41859 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g51464 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g55066 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g05538 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Sam_g05859 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g36402 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.14 OrthoFinder output from all 47 species
Sam_g36403 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.14 OrthoFinder output from all 47 species
Sam_g39914 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Sam_g42614 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo268515 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder output from all 47 species
Solyc05g008010.3.1 Solyc05g008010 component RPL31 of LSU proteome component 0.15 OrthoFinder output from all 47 species
Solyc12g008720.2.1 Solyc12g008720 component RPL31 of LSU proteome component 0.18 OrthoFinder output from all 47 species
Spa_g05504 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.18 OrthoFinder output from all 47 species
Spa_g23525 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.15 OrthoFinder output from all 47 species
Spa_g43533 No alias component *(eL31) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e003520_P001 Zm00001e003520 component RPL31 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Zm00001e015659_P001 Zm00001e015659 component RPL31 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e023413_P001 Zm00001e023413 component RPL31 of LSU proteome component 0.09 OrthoFinder output from all 47 species
Zm00001e036927_P001 Zm00001e036927 component RPL31 of LSU proteome component 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 33 114
No external refs found!