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  5. Tin_g25156

Tin_g25156 (SC35, ATSC35, At-SC35)


Aliases : SC35, ATSC35, At-SC35

Description : not classified & original description: none


Gene families : OG0001818 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001818_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g25156

Target Alias Description ECC score Gene Family Method Actions
Adi_g060585 SC35, ATSC35, At-SC35 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110137 SC35, ATSC35, At-SC35 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12134 SC35, ATSC35, At-SC35 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.09G070800.1 SC35, ATSC35,... not classified & original description: pacid=50587641... 0.03 OrthoFinder output from all 47 species
LOC_Os08g37960.1 SC35, ATSC35,... Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g01883 SC35, ATSC35, At-SC35 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001872_P001 SC35, ATSC35,... Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 19 87
No external refs found!