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  5. Tin_g24564

Tin_g24564 (ATIVD, IVD, IVDH)


Aliases : ATIVD, IVD, IVDH

Description : EC_1.3 oxidoreductase acTing on CH-CH group of donor & original description: none


Gene families : OG0001708 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001708_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g24564

Target Alias Description ECC score Gene Family Method Actions
AT3G45300 ATIVD, IVD, IVDH isovaleryl-CoA-dehydrogenase 0.02 OrthoFinder output from all 47 species
Ceric.1Z134100.1 ATIVD, IVD,... EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Ceric.36G039900.1 ATIVD, IVD,... EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Cre06.g296400 ATIVD, IVD, IVDH Amino acid metabolism.degradation.branched-chain amino... 0.06 OrthoFinder output from all 47 species
LOC_Os05g03480.2 ATIVD, IVD,... isovaleryl-CoA-dehydrogenase 0.02 OrthoFinder output from all 47 species
Mp8g15810.1 ATIVD, IVD, IVDH isovaleryl-CoA-dehydrogenase 0.02 OrthoFinder output from all 47 species
Mp8g16280.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.3... 0.02 OrthoFinder output from all 47 species
Nbi_g17073 ATIVD, IVD, IVDH EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Smo164182 ATIVD, IVD, IVDH Enzyme classification.EC_1 oxidoreductases.EC_1.3... 0.03 OrthoFinder output from all 47 species
Spa_g10667 ATIVD, IVD, IVDH EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.06 OrthoFinder output from all 47 species
Zm00001e029485_P003 ATIVD, IVD,... isovaleryl-CoA-dehydrogenase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006091 Acyl-CoA_Oxase/DH_mid-dom 230 325
IPR013786 AcylCoA_DH/ox_N 113 226
IPR009075 AcylCo_DH/oxidase_C 337 485
No external refs found!