Tin_g23904


Description : not classified & original description: none


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g23904

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00117p00057980 RIN4,... External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AT3G25070 RIN4 RPM1 interacting protein 4 0.03 OrthoFinder output from all 47 species
Ala_g01201 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.05 OrthoFinder output from all 47 species
Als_g14198 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g33282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50234 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Aop_g70445 NOI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G076700.1 RIN4, Ceric.02G076700 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.05 OrthoFinder output from all 47 species
Ceric.18G072000.1 Ceric.18G072000 not classified & original description: pacid=50621871... 0.02 OrthoFinder output from all 47 species
Ceric.22G062300.1 Ceric.22G062300 not classified & original description: pacid=50614018... 0.03 OrthoFinder output from all 47 species
Dac_g10666 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Ehy_g09036 NOI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004747001 RIN4 External stimuli response.biotic stress.pathogen... 0.06 OrthoFinder output from all 47 species
MA_10433308g0010 RIN4 RIN4 effector-triggered immunity RPM1-interacting factor 0.03 OrthoFinder output from all 47 species
Mp1g26110.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g66526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010395 No alias not classified & original description: CDS=1-855 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011890 No alias not classified & original description: CDS=1-576 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018170 RIN4 not classified & original description: CDS=1115-1720 0.03 OrthoFinder output from all 47 species
Sam_g16131 No alias regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Sam_g40068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g083390.4.1 RIN4, Solyc06g083390 RIN4 effector-triggered immunity RPM1-interacting factor 0.03 OrthoFinder output from all 47 species
Solyc09g059430.3.1 RIN4, Solyc09g059430 RIN4 effector-triggered immunity RPM1-interacting factor 0.02 OrthoFinder output from all 47 species
Spa_g07888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09622 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.04 OrthoFinder output from all 47 species
Spa_g09623 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Spa_g14777 NOI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29992 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.05 OrthoFinder output from all 47 species
Tin_g04378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003639_P001 RIN4, Zm00001e003639 RIN4 effector-triggered immunity RPM1-interacting factor 0.03 OrthoFinder output from all 47 species
Zm00001e036855_P001 Zm00001e036855 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!