Tin_g22932 (RPS15A)

Aliases : RPS15A

Description : component *(uS8) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0001724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001724_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g22932

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00192110	RPS15A,...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.07	OrthoFinder output from all 47 species
AT1G07770	RPS15A	ribosomal protein S15A	0.05	OrthoFinder output from all 47 species
AT3G46040	RPS15AD	ribosomal protein S15A D	0.06	OrthoFinder output from all 47 species
AT5G59850	No alias	Ribosomal protein S8 family protein	0.11	OrthoFinder output from all 47 species
Adi_g053042	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Aev_g20974	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Ala_g11423	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.06	OrthoFinder output from all 47 species
Ala_g32909	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Als_g06762	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Als_g25183	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Aob_g00427	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Aob_g08202	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Aop_g23610	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.1	OrthoFinder output from all 47 species
Azfi_s0035.g025499	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Azfi_s0073.g037095	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Azfi_s0078.g038157	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.06	OrthoFinder output from all 47 species
Ceric.10G044000.1	RPS15A, Ceric.10G044000	component *(uS8) of small ribosomal-subunit (SSU)...	0.09	OrthoFinder output from all 47 species
Ceric.20G029200.1	RPS15A, Ceric.20G029200	component *(uS8) of small ribosomal-subunit (SSU)...	0.06	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000158.110	RPS15A	Protein biosynthesis.cytosolic ribosome.small subunit...	0.08	OrthoFinder output from all 47 species
Cre05.g234637	RPS15A	Protein biosynthesis.cytosolic ribosome.small subunit...	0.11	OrthoFinder output from all 47 species
Dac_g01189	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Dac_g06585	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.08	OrthoFinder output from all 47 species
Dde_g00146	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
GSVIVT01016595001	RPS15A	Protein biosynthesis.cytosolic ribosome.small subunit...	0.09	OrthoFinder output from all 47 species
GSVIVT01025622001	RPS15A	Protein biosynthesis.cytosolic ribosome.small subunit...	0.05	OrthoFinder output from all 47 species
Gb_08537	RPS15A	component RPS15a of SSU proteome	0.06	OrthoFinder output from all 47 species
Gb_37191	RPS15A	component RPS15a of SSU proteome	0.02	OrthoFinder output from all 47 species
LOC_Os02g27760.1	RPS15A, LOC_Os02g27760	component RPS15a of SSU proteome	0.08	OrthoFinder output from all 47 species
LOC_Os07g10720.1	RPS15A, LOC_Os07g10720	component RPS15a of SSU proteome	0.12	OrthoFinder output from all 47 species
MA_10427318g0020	RPS15AD	component RPS15a of SSU proteome	0.07	OrthoFinder output from all 47 species
MA_57835g0010	RPS15AD	component RPS15a of SSU proteome	0.07	OrthoFinder output from all 47 species
MA_82191g0010	RPS15AD	component RPS15a of SSU proteome	0.03	OrthoFinder output from all 47 species
Mp8g06510.1	RPS15A	component RPS15a of SSU proteome	0.11	OrthoFinder output from all 47 species
Mp8g13010.1	RPS15A	component RPS15a of SSU proteome	0.09	OrthoFinder output from all 47 species
Msp_g03738	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Msp_g41302	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.06	OrthoFinder output from all 47 species
Nbi_g05066	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Pir_g00267	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Pp3c1_4290V3.1	RPS15A, Pp3c1_4290	Ribosomal protein S8 family protein	0.06	OrthoFinder output from all 47 species
Pp3c2_32050V3.1	RPS15A, Pp3c2_32050	Ribosomal protein S8 family protein	0.05	OrthoFinder output from all 47 species
Pp3c3_1140V3.1	RPS15A, Pp3c3_1140	ribosomal protein S15A	0.04	OrthoFinder output from all 47 species
Pp3c4_27540V3.1	RPS15A, Pp3c4_27540	Ribosomal protein S8 family protein	0.06	OrthoFinder output from all 47 species
Ppi_g61636	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Sam_g00243	No alias	component *(uS8) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Sam_g09165	No alias	component *(uS8) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Smo228163	RPS15A	Protein biosynthesis.cytosolic ribosome.small subunit...	0.07	OrthoFinder output from all 47 species
Solyc04g150158.1.1	RPS15A, Solyc04g150158	component RPS15a of SSU proteome	0.1	OrthoFinder output from all 47 species
Solyc04g150159.1.1	RPS15A, Solyc04g150159	component RPS15a of SSU proteome	0.02	OrthoFinder output from all 47 species
Spa_g17843	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.09	OrthoFinder output from all 47 species
Spa_g17844	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Spa_g29032	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.06	OrthoFinder output from all 47 species
Spa_g35400	RPS15A	component *(uS8) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Zm00001e016394_P001	RPS15A, Zm00001e016394	component RPS15a of SSU proteome	0.11	OrthoFinder output from all 47 species
Zm00001e026115_P001	RPS15A, Zm00001e026115	component RPS15a of SSU proteome	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005740	mitochondrial envelope	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008175	tRNA methyltransferase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
CC	GO:0008250	oligosaccharyltransferase complex	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	HCCA
CC	GO:0030131	clathrin adaptor complex	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
CC	GO:0034998	oligosaccharyltransferase I complex	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
CC	GO:0045277	respiratory chain complex IV	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000630	Ribosomal_S8	26	132

External Links

No external refs found!

Tin_g22932 (RPS15A)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation