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  5. Tin_g22892

Tin_g22892 (TIF3E1, INT6,...)


Aliases : TIF3E1, INT6, ATEIF3E-1, INT-6, ATINT6, EIF3E

Description : component *(eIF3e) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0003899 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003899_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g22892

Target Alias Description ECC score Gene Family Method Actions
Aop_g03167 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Ceric.37G014400.1 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.43 TIF3E1, INT6,... Protein biosynthesis.translation... 0.01 OrthoFinder output from all 47 species
Cre12.g498100 TIF3E1, INT6,... Protein biosynthesis.translation... 0.05 OrthoFinder output from all 47 species
Dac_g22935 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g01164 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os07g12110.1 TIF3E1, INT6,... component eIF3e of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
MA_7274g0020 TIF3E1, INT6,... component eIF3e of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Mp3g01990.1 TIF3E1, INT6,... component eIF3e of eIF3 mRNA-to-PIC binding complex 0.05 OrthoFinder output from all 47 species
Msp_g10381 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.06 OrthoFinder output from all 47 species
Pir_g09568 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Sam_g18402 No alias component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Solyc10g079880.2.1 TIF3E1, INT6,... component eIF3e of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Spa_g47127 TIF3E1, INT6,... component *(eIF3e) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR019010 eIF3e_N 14 146
IPR000717 PCI_dom 294 408
No external refs found!