1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g22845

Tin_g22845 (UBQ11)


Aliases : UBQ11

Description : UBQ ubiquiTin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g22845

Target Alias Description ECC score Gene Family Method Actions
Ala_g34261 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18351 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Als_g49627 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10329 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aob_g18513 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23077.t1 UBQ4, Aspi01Gene23077 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43294.t1 UBQ6, Aspi01Gene43294 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g15004 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dde_g08812 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os02g06640.1 UBQ10, LOC_Os02g06640 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
Len_g04120 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g22645 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23365 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g27408 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Mp4g02740.1 UBQ10 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
Msp_g30561 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31020 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g39867 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23397 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02936 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g38541 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g26909 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005542 UBQ6 not classified & original description: CDS=139-318 0.03 OrthoFinder output from all 47 species
Smo101548 No alias Polyubiquitin 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g31029 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48573 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 2 73
IPR000626 Ubiquitin-like_dom 78 149
No external refs found!