1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g21965

Tin_g21965


Description : metal chelator nicotianamine transporter *(TCR) & original description: none


Gene families : OG0005094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005094_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g21965

Target Alias Description ECC score Gene Family Method Actions
AT5G42210 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
MA_10023347g0010 No alias metal chelator transporter (TCR). metal chelator... 0.02 OrthoFinder output from all 47 species
Ore_g41103 No alias metal chelator nicotianamine transporter *(TCR) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006253 No alias metal chelator nicotianamine transporter *(TCR) &... 0.03 OrthoFinder output from all 47 species
Solyc04g081990.3.1 Solyc04g081990 metal chelator transporter (TCR). metal chelator... 0.05 OrthoFinder output from all 47 species
Solyc10g055770.2.1 Solyc10g055770 metal chelator transporter (TCR). metal chelator... 0.03 OrthoFinder output from all 47 species
Solyc12g094400.2.1 Solyc12g094400 metal chelator transporter (TCR). metal chelator... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR011701 MFS 41 408
No external refs found!