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Description : RNA ediTing factor *(OZ) & original description: none
Gene families : OG0001673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001673_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00057p00189360 | evm_27.TU.AmTr_v1... | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00170p00058310 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AT1G48570 | No alias | zinc finger (Ran-binding) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G55040 | No alias | zinc finger (Ran-binding) family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g054823 | No alias | RNA editing factor *(OZ) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g084389 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g20942 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11397 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g19541 | No alias | RNA editing factor *(OZ) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g15963 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0661.g081440 | No alias | RNA editing factor *(OZ) & original description: CDS=90-3326 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14180 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G001300.1 | Ceric.03G001300 | RNA editing factor *(OZ) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.26G046600.1 | Ceric.26G046600 | RNA editing factor *(OZ) & original description:... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g22806 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02287 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000088001 | No alias | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008444001 | No alias | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Gb_38905 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g10630.1 | LOC_Os01g10630 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os03g50120.1 | LOC_Os03g50120 | RNA editing factor (OZ-type) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g50430.1 | LOC_Os03g50430 | RNA editing factor (OZ-type) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g18415 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10434973g0010 | No alias | RNA editing factor (OZ-type) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10436123g0010 | No alias | RNA editing factor (OZ-type) | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g05510.1 | No alias | RNA editing factor (OZ-type) | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g15706 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06378 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07101 | No alias | RNA editing factor *(OZ) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g50896 | No alias | RNA editing factor *(OZ) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo426987 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Smo438605 | No alias | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g11918 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21486 | No alias | RNA editing factor *(OZ) & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| MF | GO:0031369 | translation initiation factor binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |