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  5. Tin_g20328

Tin_g20328


Description : not classified & original description: none


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g20328

Target Alias Description ECC score Gene Family Method Actions
Aev_g19712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08140 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0015.g014174 No alias not classified & original description: CDS=345-4727 0.05 OrthoFinder output from all 47 species
Dac_g12522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008971001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01028978001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_20633 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_26931 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os10g36060.1 LOC_Os10g36060 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g39950.1 LOC_Os10g39950 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g08370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_123836g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g13212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06501 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g08920 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g072630.4.1 Solyc04g072630 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g04859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004411_P002 Zm00001e004411 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e012583_P001 Zm00001e012583 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!